Table 1

Genes altered following oxythioquinox exposure. Table represents data mined from HuGeneFL microarrays (Affymetrix). All genes selected have a signal log ratio of ± 0.6 unless otherwise noted. Representative genes for each group were selected based on their function and are shown here.

GenBank ID
Name
Peak Expression Level (SLR)
Functional Class

Genes increased in three or more strains (n = 13):
     U22028
CYP2A13
1.5
xenobiotic metabolism
     U20734
junB
3.42
transcription
     V01512
cfos
2.04
transcription
     S85655
prohibitin
0.75
cell proliferation
     S82240
RhoE GTPase
2.81
signal transduction
     M69043
MAD-3 mRNA encoding IkB-like activity
0.83
apoptosis
     M63573
cyclophilin
1.68
immune response
     U05861
Dihydrodiol dehydrogenase
2.52
xenobiotic metabolism
Genes decreased in three or more strains (n = 23):
     L05624
MAP Kinase Kinase
-0.67
signal transduction
     U18018
E1A enhancer
-1.34
transcription
     X56681
junD
-1.03
transcription
     X68836
S-adenosylmethionine synthetase
-2.57
cell metabolism
     J04973
Cytochrome bc-1
-3.12
cell metabolism
Genes altered in at least two of four cell strains (n = 189):
     X03484
raf oncogene
1.46
carcinogenesis
     M60974
growth arrest and DNA-damage-inducible protein (gadd45)
1.51
DNA damage
     M57731
Human gro-beta
1.85
immune response
     X66899
EWS
1.2
carcinogenesis
     Z29087*
Cyclin D1 Promoter
1.03
cell cycle control
     L10910
Splicing Factor CC1.3
0.62
RNA processing
     M83667
NF-IL6 Permeability Factor
1.55
transcription
     M27281
Vascular Permeability Factor
-1.09
cell proliferation
     L28010
HnRNP F protein
-0.55
RNA processing
     U72649
BTF2
-1.86
carcinogenesis
     M19267
tropomyosin
-1.16
cardiac
     M38258
retinoic acid receptor gamma 1
-0.94
cell metabolism
     U42031
Immunophilin
-1.41
immune response
     U67122
ubiquitin-related SUMO-1
-1.03
protein metabolism
     X70340
Transforming growth factor alpha
-0.57
cell proliferation
     M34458
Lamin B
-1.33
cell proliferation

*No accession number was used by Affymetrix. This accession number most closely matches the probe description and sequence.

Gwinn et al. Environmental Health: A Global Access Science Source 2004 3:9   doi:10.1186/1476-069X-3-9